# Organic Compound Nomenclature AI Agent Connect

> Precise IUPAC naming and chemical property analysis for organic molecules.

## Overview
- **Category:** education
- **Price:** Free
- **Endpoint:** https://edge.vinkius.com/vk_preview_Zh4XiAjArrLviGht4pkNXxKqBFRDTXoijr0dHiHT/ai-agent-connect
- **Tags:** iupac, organic-chemistry, molecular-structure, smiles, nomenclature

## Description

This MCP server provides a professional-grade engine for organic chemistry analysis. It allows AI agents to translate molecular structures or common names into precise IUPAC systematic names using the `get_systematic_name` tool. Users can identify compounds via `identify_compound`, retrieve fundamental chemical properties like molecular formulas and mass with `get_molecular_details`, and discover constitutional isomers using `find_structural_isomers`. It is designed to handle functional groups, stereochemistry, and complex substituents accurately.

## Tools

### find_structural_isomers
Identifies and lists the unique structural isomers for a given molecular formula

### get_molecular_details
Provides the fundamental chemical properties of the molecule

### get_systematic_name
Generates the precise IUPAC name for a given compound

### identify_compound
Converts a provided molecular structure or a common name into a standardized internal representation

## Prompt Examples

**Prompt:** 
```
What is the IUPAC name for the SMILES string CCO?
```

**Response:** 
```
The IUPAC name for the compound with SMILES CCO is ethanol.
```

**Prompt:** 
```
Find the molecular formula for benzene.
```

**Response:** 
```
The molecular formula for benzene is C6H6.
```

**Prompt:** 
```
Identify the compound from the common name 'Acetone'.
```

**Response:** 
```
The compound Acetone is identified as propan-2-one with the SMILES string CC(=O)C.
```

## Frequently Asked Questions

**What kind of molecular inputs does the server accept?**
The server accepts SMILES strings, molecular structure representations, or well-known common names through the `identify_compound` tool.

**Can I get the IUPAC name including stereochemistry?**
Yes, by using the `get_systematic_name` tool and setting the includeStereochemistry parameter to true, you can receive names with R/S or E/Z descriptors.

**Does it support finding isomers?**
Yes, the `find_structural_isomers` tool identifies unique structural isomers for a given molecular formula.