How do I use this MCP with Claude?

You connect your Claude desktop app to the Vinkius host, and the restriction enzyme capabilities will appear as available functions for your agent to call.

Can this MCP predict gel electrophoresis results?

Yes, by using the digestion pattern capability, your agent can calculate the specific sizes of DNA fragments, which you can then use to predict band positions.

What is star activity in this context?

Star activity refers to non-specific enzyme cutting. This MCP includes a capability to simulate these patterns so you can see how they change your expected fragment results.

Does this work with any DNA sequence?

The capabilities are designed to process DNA sequences to calculate how specific enzymes will cut them.

Do I need to host the MCP myself?

No, Vinkius hosts and manages the MCP, so you only need to connect your client to start using the capabilities.

How do I calculate fragment sizes?

You can use the analyze_digestion_pattern capability by providing the DNA sequence and the list of enzyme IDs.

Can I simulate non-specific cutting?

Yes, the simulate_star_activity capability allows you to predict how fragment patterns change when an enzyme exhibits star activity.

How do I find enzymes with the same recognition site?

Use the find_isoschizomers capability with the specific enzyme ID to find its isoschizomers.

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Connect Restriction Enzyme Analysis to ChatGPT and Claude

Set it up once and it works in ChatGPT, Claude, Cursor, and any other client you love. It all runs safely in the background, so you can relax and focus on what really matters. Perform precise DNA digestion and fragment analysis through your AI agent.

Ask AI about this Connector

Developed, maintained, and hosted by Vinkius.

MCP VERIFIED · PRODUCTION READY · VINKIUS GUARANTEED

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Works with modern AI clients that support MCP, including ChatGPT, Claude, Cursor, and more.

Your AI does the work. We keep it safe and sound.

No other AI tool gives you this. Your workflow runs in the client you already love, your account stays protected, and you decide what the agent can and cannot do. It is the whole reason to make the switch.

Each Connector lives inside our infrastructure, the same place where your workflow runs. The three things below are already part of it, working quietly in the background so you never have to think about them. Nothing to add, nothing to set up, nothing to worry about.

V8 Isolate01

Each Connector runs inside its own sealed environment.

Each Connector runs inside its own sealed V8 runtime — no access to your files, your system, or other servers. A Connector never sees past its own request.

Kill Switch02

One switch stops every agent. Instantly.

One action deactivates every Connector, revokes every token, and ends every session at once. AI Governance keeps the record.

FinOps per User03

Spending limits that pause instead of surprise.

Every user keeps their own connections and credentials, isolated from everyone else. Anything that would cross your spending limit is held for your approval, not billed.

Three controls, built into the layer your AI connects through.

Curated set · 4 capabilities

We ship only the actions that matter.

Capability set01 / 01

01-04

4 capabilities in this set.

Part of 4 available through Restriction Enzyme Analysis.

01
Analyze digestion pattern
This capability calculates the resulting DNA fragments when a specific sequence is cut by an enzyme.
02
Find isoschizomers
Use this to identify different enzymes that recognize the exact same DNA sequence.
03
Get enzyme profile
This capability pulls the specific cutting characteristics and recognition sequences for a single enzyme.
04
Simulate star activity
This capability predicts how fragment patterns shift when an enzyme begins cutting at non-target sites.

Real work

What teams actually run

Cloning Design

Your agent checks if a chosen enzyme will cut within your target sequence before you start a ligation.

Gel Electrophoresis Planning

The AI predicts fragment sizes to help you estimate where bands will appear on a gel.

Enzyme Troubleshooting

You simulate star activity to understand why an unexpected band appeared in your results.

Protocol Optimization

The agent finds isoschizomers to help you switch enzymes based on buffer or activity needs.

One connector, every AI

Restriction Enzyme Analysis works with the most popular AI clients.

These are the most popular clients, each with a step-by-step guide: one link, set up once, with governance and visibility built in. And because everything runs on the MCP standard, the same connection also works in any other compatible client — nothing to rebuild.

Building your own app? The connector is yours to use.

You don't need a client to put Restriction Enzyme Analysis to work: the same hosted connection plugs into your own applications and agent code, with the same governance on every request. Build with it, chat with it — one connection for both.

Observed, not estimated

915ms average. Fast in production.

Restriction Enzyme Analysis is checked daily against the live service.

Daily averagePeak 1095ms

Oct 3Today

Fastest day: 719ms
Slowest day: 1095ms
14-day trend: Improving-5%

Connect your client

One URL. Every client.

Activate the Connector, copy your link, and paste it into the client you already use. 4 capabilities arrive ready to run.

Preview access · not provider authentication

The vk_preview_* token belongs to Vinkius preview infrastructure. It lets Claude discover and display the capabilities of Restriction Enzyme Analysis, so you can see the experience inside your AI.

It does not authenticate your account with Restriction Enzyme Analysis. Actions requiring credentials or live account data may not run until you activate the Connector and authorize the service.

Restriction Enzyme Analysis Connector

You're all set. Choose your MCP client and follow the setup instructions.

Connector linkhttps://edge.vinkius.com/vk_preview_D0skpeu0xtEDdKr6RFQ9fUr16OUucz9XBlZ0PEsu/mcp

Claude Desktop

Follow the steps below to connect in seconds.

1In Claude Desktop, open Settings → Connectors.
2Click “Add custom connector” and paste the connector link above as the remote MCP server URL.
3Click Add and start a new chat — Restriction Enzyme Analysis capabilities are ready to use.

Configuration · claude_desktop_config.jsonCopy

{
  "mcpServers": {
    "restriction-enzyme-analysis-mcp": {
      "url": "https://edge.vinkius.com/vk_preview_D0skpeu0xtEDdKr6RFQ9fUr16OUucz9XBlZ0PEsu/mcp"
    }
  }
}

Claude
ChatGPT
Cursor
VS Code
Windsurf
Claude Code
JetBrains
Cline

Step-by-step instructions for each client are in the guide. How to connect

Guided setup for Claude? Set up Restriction Enzyme Analysis in Claude and other AIs

See all the AI clients this connector works with ↑

Who it's for

Built for the work Restriction Enzyme Analysis owners hand off.

This MCP is built for researchers and bioinformaticians who want to integrate genetic analysis into their AI-driven workflows.

01
Molecular Biologists
They use the agent to plan restriction digests and predict experimental outcomes.
02
Bioinformaticians
They automate sequence analysis and enzyme characteristic lookups.
03
Genetic Engineers
They use the capabilities to verify cutting sites and identify isoschizomers for cloning.

FAQ

Questions Restriction Enzyme Analysis owners ask.

01
How do I use this MCP with Claude?
You connect your Claude desktop app to the Vinkius host, and the restriction enzyme capabilities will appear as available functions for your agent to call.
02
Can this MCP predict gel electrophoresis results?
Yes, by using the digestion pattern capability, your agent can calculate the specific sizes of DNA fragments, which you can then use to predict band positions.
03
What is star activity in this context?
Star activity refers to non-specific enzyme cutting. This MCP includes a capability to simulate these patterns so you can see how they change your expected fragment results.
04
Does this work with any DNA sequence?
The capabilities are designed to process DNA sequences to calculate how specific enzymes will cut them.
05
Do I need to host the MCP myself?
No, Vinkius hosts and manages the MCP, so you only need to connect your client to start using the capabilities.
06
How do I calculate fragment sizes?
You can use the analyze_digestion_pattern capability by providing the DNA sequence and the list of enzyme IDs.
07
Can I simulate non-specific cutting?
Yes, the simulate_star_activity capability allows you to predict how fragment patterns change when an enzyme exhibits star activity.
08
How do I find enzymes with the same recognition site?
Use the find_isoschizomers capability with the specific enzyme ID to find its isoschizomers.

Explore

More in Science

Connect Restriction Enzyme Analysis to Claude, Cursor, ChatGPT & more

Your AI does the work. We keep it safe and sound.

Each Connector runs inside its own sealed environment.

One switch stops every agent. Instantly.

Spending limits that pause instead of surprise.

We ship only the actions that matter.

01-04

Analyze digestion pattern

Find isoschizomers

Get enzyme profile

Simulate star activity

What teams actually run

Cloning Design

Gel Electrophoresis Planning

Enzyme Troubleshooting

Protocol Optimization

Building your own app? The connector is yours to use.

Restriction Enzyme Analysis Connector

Claude Desktop

Molecular Biologists

Bioinformaticians

Genetic Engineers

How do I use this MCP with Claude?

Can this MCP predict gel electrophoresis results?

What is star activity in this context?

Does this work with any DNA sequence?

Do I need to host the MCP myself?

How do I calculate fragment sizes?

Can I simulate non-specific cutting?

How do I find enzymes with the same recognition site?

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