• UPDATED
  • VERSIONED
  • REMOVED
  • HUMAN

How to update research metadata with your AI

Connect Zenodo to your AI client to manage your research records without leaving your chat window.

Ask AI about this page

Short answer

How can I change my Zenodo deposition info?

You tell your AI what needs changing, and it uses the Zenodo MCP to modify your records or create new versions. This handles everything from fixing typos in titles to publishing updated datasets.

Where every change lands.

Metadata management outcomes

The AI handles the technical calls to Zenodo so your records stay accurate.

UPDATED

Corrected records

The AI fixes existing metadata like titles or descriptions. Your published records reflect the new information immediately.

VERSIONED

New dataset versions

When you need to upload a new file, the AI creates a new version of the deposition. This keeps your research history intact and traceable.

REMOVED

Discarded drafts

If you made a mistake during the upload process, the AI can drop the unfinished deposition. This keeps your Zenodo profile clean.

HUMAN

Final verification

You review the changes the AI proposes before they are finalized. You remain in control of what actually gets published to the repository.

The workflow

What your AI does when a change is requested.

The AI translates your natural language instructions into specific Zenodo API calls.

  1. Identify the record

    Your AI locates the specific deposition you want to change based on the ID or title you provide.

    edit_deposition

  2. Modify existing data

    The AI updates the metadata fields for a record that is already live or in draft status.

    update_deposition

  3. Handle versioning

    If the data change requires a new iteration, the AI creates a fresh version of the deposition.

    new_version_deposition

  4. Clean up mistakes

    If a draft was created by accident, the AI removes the unwanted record.

    discard_deposition

Try it

Copy these to start.

Use these prompts to trigger actions in Zenodo.

Starting points

Replace the bracketed info with your actual Zenodo DOI or deposition ID.

Zenodo Connector

You're all set. Choose your MCP client and follow the setup instructions.

Connector linkhttps://edge.vinkius.com/vk_preview_yWiQbX1r2ufIXB35jGua6AzTtIHwHneC0nVPdaqJ/mcp

Claude Desktop

Follow the steps below to connect in seconds.

  1. 1In Claude Desktop, open Settings → Connectors.
  2. 2Click “Add custom connector” and paste the connector link above as the remote MCP server URL.
  3. 3Click Add and start a new chat — Zenodo capabilities are ready to use.
Configuration · claude_desktop_config.jsonCopy
{
  "mcpServers": {
    "zenodo-mcp": {
      "url": "https://edge.vinkius.com/vk_preview_yWiQbX1r2ufIXB35jGua6AzTtIHwHneC0nVPdaqJ/mcp"
    }
  }
}
Copy into chat04

  • Update the title of deposition [DOI] to '[New Title]'

  • Create a new version of the record [DOI] with these updated details

  • I made a mistake on this draft, please discard deposition [DOI]

  • Change the description for [DOI] to include the new funding information

  • Claude
  • ChatGPT
  • Cursor
  • VS Code
  • Windsurf
  • Claude Code
  • JetBrains
  • Cline

Start here

Connect Zenodo once, then ask.

Log in to your Zenodo account through the Vinkius interface. Once connected, your AI client can immediately start managing your research metadata.

Connect Zenodo to your AI

FAQ

How this task behaves.

  • 01

    Can the AI delete a published record?

    No. The tools only allow for editing, versioning, or discarding drafts. Published records stay permanent.

  • 02

    Does the AI need my Zenodo password?

    No. You connect via Vinkius, and your credentials stay encrypted and secure.

  • 03

    Will the AI automatically publish changes?

    The AI performs the actions you request, but you should always review the proposed metadata before confirming the update.

  • 04

    Can I upload new files using this MCP?

    No. The current tools focus on managing metadata and versioning existing depositions rather than raw file uploads.

  • 05

    Can the AI change the DOI of a record?

    No. DOIs are permanent identifiers and cannot be modified through these tools.

  • More questions about Zenodo? See everything the Zenodo Connector can do

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