Integrate Stanford bioRxiv with Claude, Cursor, Chatbots & AI Agents MCP Server
GDPR Free for SubscribersCompatible with every major AI agent and IDE
GeminiGet preprint on Stanford bioRxiv
Searches both bioRxiv and medRxiv. Returns title, authors, corresponding author and institution, date, version, category, abstract, and license. DOI format: "10.1101/2024.01.15.575123". Get preprint details by DOI
Get preprint versions on Stanford bioRxiv
Preprints on bioRxiv/medRxiv can be updated multiple times. This lets you see the full revision history and understand how a manuscript has evolved. Get all versions of a preprint to track revisions
Get published tracking on Stanford bioRxiv
Shows the preprint DOI, published DOI, journal name, and publication date. Essential for understanding the preprint-to-publication pipeline. Track which preprints have been published in journals
Get published version on Stanford bioRxiv
Returns the published DOI, journal citation, and publication date. Essential for finding the final, peer-reviewed version of a preprint you have read. Find the journal-published version of a preprint
Get recent biorxiv on Stanford bioRxiv
Default is 7 days. Essential for staying at the cutting edge of biological research — preprints appear here 6-12 months before peer-reviewed publication. Get the latest bioRxiv preprints
Get recent medrxiv on Stanford bioRxiv
Covers clinical medicine, epidemiology, public health, and health systems research. Critical for monitoring emerging health research before journal publication. Get the latest medRxiv preprints
Search biorxiv on Stanford bioRxiv
The bioRxiv API returns preprints in batches of 100. Use the date interval format "YYYY-MM-DD/YYYY-MM-DD" (e.g. "2024-01-01/2024-01-31"). Use cursor for pagination (0, 100, 200, etc.). Browse bioRxiv preprints by date range
Search by category on Stanford bioRxiv
bioRxiv categories include: neuroscience, genomics, bioinformatics, cell_biology, cancer_biology, immunology, microbiology, molecular_biology, biochemistry, genetics, developmental_biology, evolutionary_biology, ecology, plant_biology, physiology, pharmacology, systems_biology, biophysics, synthetic_biology. medRxiv categories: epidemiology, infectious_diseases, public_and_global_health, health_systems, cardiovascular_medicine, oncology, psychiatry, neurology. Filter preprints by subject category
Search by institution on Stanford bioRxiv
Use this to explore what institutions are producing preprints in a given time period. Each preprint includes the corresponding author and their institutional affiliation. Browse preprints with author institution metadata
Search cancer on Stanford bioRxiv
Covers tumor biology, oncogenomics, cancer immunology, drug resistance, and experimental therapeutics. Browse cancer biology preprints
Search cell biology on Stanford bioRxiv
Covers cell signaling, organelle biology, cytoskeleton, cell division, stem cells, and cellular mechanisms of disease. Browse cell biology preprints
Search epidemiology on Stanford bioRxiv
Covers disease surveillance, outbreak analysis, population health, health policy, and clinical epidemiology. Critical for public health monitoring. Browse epidemiology and public health preprints
Search genomics on Stanford bioRxiv
Covers genome sequencing, gene regulation, epigenomics, metagenomics, and computational genomics — core disciplines in modern biology. Browse genomics and bioinformatics preprints
Search immunology on Stanford bioRxiv
Covers immune system research, host-pathogen interactions, vaccine development, autoimmune diseases, and immunotherapy. Browse immunology and microbiology preprints
Search medrxiv on Stanford bioRxiv
medRxiv covers clinical research, epidemiology, public health, and health policy. Use interval "YYYY-MM-DD/YYYY-MM-DD" format. Results paginated in batches of 100. Browse medRxiv preprints by date range
Search neuroscience on Stanford bioRxiv
Neuroscience is one of the largest and most active categories, covering brain research, neural circuits, cognitive science, and neurological disorders. Browse neuroscience preprints
Security & Code Integrity Audit
Every tool in the Stanford bioRxiv MCP Server is continuously audited by the Vinkius Security Engine. We guarantee zero-trust payload isolation, strict data boundaries, and deterministic execution for enterprise-grade AI agents.
How Vinkius protects your data
How does the AI access my passwords and credentials?
It simply doesn't. On Vinkius, your passwords, API keys, and login details are kept in a secure vault. The AI (like ChatGPT or Claude) merely "asks" Vinkius to perform the task. Vinkius opens the door, does the work, and hands the result back to the AI. Your credentials are never seen, read, or learned by the artificial intelligence.
What if the AI ends up reading customer data or confidential information?
We have a built-in digital "bodyguard" called DLP (Data Loss Prevention). If a tool fetches data and the response contains social security numbers, credit cards, or personal customer info, Vinkius magically blocks and erases that information before it is delivered to the AI. The AI works only with what is strictly necessary, and your sensitive data never leaks.
Do I need an API key?
No. The bioRxiv and medRxiv APIs are completely free and public.
Does the AI train on my tools or API data?
No. Vinkius enforces a strict Zero-Retention policy. Your data simply passes through our secure servers to complete the requested action and is instantly forgotten. Nothing you do here is ever stored, logged, or used to train any artificial intelligence.
Stanford bioRxiv Capabilities for AI Assistants
The Stanford bioRxiv MCP server handles authentication and payload formatting, allowing your LLM to perform deterministic actions.
AI Semantic Routing for biorxiv
Use the Stanford bioRxiv MCP to manage biorxiv requests. Models like Claude Code utilize this connection to perform reliable education updates.
The Future of medrxiv
The Stanford bioRxiv MCP manages API routing for medrxiv. This enables AI agents like Claude Code to execute structured education queries.
Stanford bioRxiv. Runs on everything.
From IDE to framework. Every connection governed by Vinkius.
Anthropic's native desktop app for Claude with built-in MCP support.
AI-first code editor with integrated LLM-powered coding assistance.
GitHub Copilot in VS Code with Agent mode and MCP support.
Purpose-built IDE for agentic AI coding workflows.
Autonomous AI coding agent that runs inside VS Code.
Anthropic's agentic CLI for terminal-first development.
Python SDK for building production-grade OpenAI agent workflows.
Google's framework for building production AI agents.
Type-safe agent development for Python with first-class MCP support.
TypeScript toolkit for building AI-powered web applications.
TypeScript-native agent framework for modern web stacks.
Python framework for orchestrating collaborative AI agent crews.
Leading Python framework for composable LLM applications.
Data-aware AI agent framework for structured and unstructured sources.
Microsoft's framework for multi-agent collaborative conversations.
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