Harvard ClinicalTrials MCP Server for AutoGenGive AutoGen instant access to 16 tools to Get Api Version, Get Study, Get Study Results, and more
GDPR Free for SubscribersMicrosoft AutoGen enables multi-agent conversations where agents negotiate, delegate, and execute tasks collaboratively. Add Harvard ClinicalTrials as an MCP tool provider through Vinkius and every agent in the group can access live data and take action.
Ask AI about this MCP Server for AutoGen
The Harvard ClinicalTrials MCP Server for AutoGen is a standout in the Data Analytics category — giving your AI agent 16 tools to work with, ready to go from day one.
Vinkius delivers Streamable HTTP and SSE to any MCP client
Geminiimport asyncio
from autogen_agentchat.agents import AssistantAgent
from autogen_ext.tools.mcp import McpWorkbench
async def main():
# Your Vinkius token. get it at cloud.vinkius.com
async with McpWorkbench(
server_params={"url": "https://edge.vinkius.com/[YOUR_TOKEN_HERE]/mcp"},
transport="streamable_http",
) as workbench:
tools = await workbench.list_tools()
agent = AssistantAgent(
name="harvard_clinicaltrials_agent",
tools=tools,
system_message=(
"You help users with Harvard ClinicalTrials. "
"16 tools available."
),
)
print(f"Agent ready with {len(tools)} tools")
asyncio.run(main())
* Every MCP server runs on Vinkius-managed infrastructure inside AWS - a purpose-built runtime with per-request V8 isolates, Ed25519 signed audit chains, and sub-40ms cold starts optimized for native MCP execution. See our infrastructure
About Harvard ClinicalTrials MCP Server
Connect to the ClinicalTrials.gov API v2 — the largest database of clinical studies worldwide, maintained by the U.S. National Library of Medicine.
AutoGen enables multi-agent conversations where agents negotiate, delegate, and collaboratively use Harvard ClinicalTrials tools. Connect 16 tools through Vinkius and assign role-based access. a data analyst queries while a reviewer validates, with optional human-in-the-loop approval for sensitive operations.
What you can do
- Study Search — Search 400K+ clinical trials from 220+ countries
- Condition Filter — Find trials for specific diseases (cancer, diabetes, Alzheimer's)
- Intervention Filter — Search by drug, device, or therapy name
- Sponsor Search — Find trials by organization (Pfizer, NIH, Roche)
- Phase Filter — Filter by Phase 1-4 to track drug development stages
- Recruiting — Find trials currently enrolling participants
- Location — Search by city or country for accessible trials
- FDA Regulated — Filter for FDA-regulated drug and device trials
- Pediatric — Find trials including children
- Rare Diseases — Discover research for orphan conditions
- Results — Get outcome data from completed studies
The Harvard ClinicalTrials MCP Server exposes 16 tools through the Vinkius. Connect it to AutoGen in under two minutes — credentials fully managed, no infrastructure to provision, no vendor lock-in. Your configuration, your data, your control.
All 16 Harvard ClinicalTrials tools available for AutoGen
When AutoGen connects to Harvard ClinicalTrials through Vinkius, your AI agent gets direct access to every tool listed below — spanning clinical-trials, medical-research, drug-development, and more. Every call runs in a secure, isolated environment with full audit visibility. Beyond a simple connection, you get real-time monitoring of agent activity, enterprise governance, and optimized token usage.
Get api version on Harvard ClinicalTrials
gov API version and the timestamp of the most recent data update. Useful for verifying data currency and API availability. Get API version and data timestamp
Get study on Harvard ClinicalTrials
g. "NCT04368728"). Returns title, status, phase, enrollment, conditions, interventions, eligibility criteria, sponsor, and study locations. Get clinical trial details by NCT ID
Get study results on Harvard ClinicalTrials
Not all trials report results — this is most useful for completed Phase 2-4 studies. Get primary outcome results for a trial
Get study timeline on Harvard ClinicalTrials
Essential for understanding the progress and currency of a study. Get the complete timeline of a clinical trial
Search by condition on Harvard ClinicalTrials
Examples: "diabetes", "breast cancer", "Alzheimer disease", "COVID-19", "depression", "hypertension". Search trials by medical condition
Search by intervention on Harvard ClinicalTrials
Examples: "pembrolizumab", "metformin", "radiation therapy", "cognitive behavioral therapy". Search trials by drug or treatment
Search by location on Harvard ClinicalTrials
Essential for finding trials accessible to patients in a particular area. Search trials by geographic location
Search by phase on Harvard ClinicalTrials
Phase values: "PHASE1", "PHASE2", "PHASE3", "PHASE4", "EARLY_PHASE1". Phase 3 trials are the largest and most definitive, while Phase 1 trials focus on safety. Search trials by study phase
Search by sponsor on Harvard ClinicalTrials
Examples: "Pfizer", "National Cancer Institute", "Roche", "Novartis", "NIH". Search trials by sponsoring organization
Search completed on Harvard ClinicalTrials
Completed trials are more likely to have published results and outcomes data. Search completed clinical trials
Search device trials on Harvard ClinicalTrials
Covers diagnostic devices, surgical tools, implants, and digital health technologies. Search medical device clinical trials
Search fda regulated on Harvard ClinicalTrials
S. Food and Drug Administration. These trials follow the most rigorous regulatory standards. Search FDA-regulated drug trials
Search pediatric on Harvard ClinicalTrials
Essential for pediatricians, child health researchers, and parents seeking trials for children. Search pediatric clinical trials
Search rare diseases on Harvard ClinicalTrials
Examples: "cystic fibrosis", "sickle cell disease", "Huntington disease", "amyotrophic lateral sclerosis". Search rare disease clinical trials
Search recruiting on Harvard ClinicalTrials
Essential for patients seeking to enroll in trials or researchers tracking active studies. Search for currently recruiting studies
Search studies on Harvard ClinicalTrials
gov database of over 400,000 clinical studies from 200+ countries. Returns NCT IDs, titles, status, phases, sponsors, conditions, interventions, and locations. Search 400K+ clinical trials worldwide
Connect Harvard ClinicalTrials to AutoGen via MCP
Follow these steps to wire Harvard ClinicalTrials into AutoGen. The entire setup takes under two minutes — your credentials stay safe behind Vinkius.
Install AutoGen
pip install "autogen-ext[mcp]"Replace the token
[YOUR_TOKEN_HERE] with your Vinkius tokenIntegrate into workflow
Explore tools
Why Use AutoGen with the Harvard ClinicalTrials MCP Server
AutoGen provides unique advantages when paired with Harvard ClinicalTrials through the Model Context Protocol.
Multi-agent conversations: multiple AutoGen agents discuss, delegate, and collaboratively use Harvard ClinicalTrials tools to solve complex tasks
Role-based architecture lets you assign Harvard ClinicalTrials tool access to specific agents. a data analyst queries while a reviewer validates
Human-in-the-loop support: agents can pause for human approval before executing sensitive Harvard ClinicalTrials tool calls
Code execution sandbox: AutoGen agents can write and run code that processes Harvard ClinicalTrials tool responses in an isolated environment
Harvard ClinicalTrials + AutoGen Use Cases
Practical scenarios where AutoGen combined with the Harvard ClinicalTrials MCP Server delivers measurable value.
Collaborative analysis: one agent queries Harvard ClinicalTrials while another validates results and a third generates the final report
Automated review pipelines: a researcher agent fetches data from Harvard ClinicalTrials, a critic agent evaluates quality, and a writer produces the output
Interactive planning: agents negotiate task allocation using Harvard ClinicalTrials data to make informed decisions about resource distribution
Code generation with live data: an AutoGen coder agent writes scripts that process Harvard ClinicalTrials responses in a sandboxed execution environment
Example Prompts for Harvard ClinicalTrials in AutoGen
Ready-to-use prompts you can give your AutoGen agent to start working with Harvard ClinicalTrials immediately.
"Find recruiting Phase 3 trials for breast cancer immunotherapy"
"Search for Alzheimer's disease trials sponsored by NIH in Boston"
"Find pediatric clinical trials for cystic fibrosis"
Troubleshooting Harvard ClinicalTrials MCP Server with AutoGen
Common issues when connecting Harvard ClinicalTrials to AutoGen through Vinkius, and how to resolve them.
McpWorkbench not found
pip install "autogen-ext[mcp]"Harvard ClinicalTrials + AutoGen FAQ
Common questions about integrating Harvard ClinicalTrials MCP Server with AutoGen.
How does AutoGen connect to MCP servers?
Can different agents have different MCP tool access?
Does AutoGen support human approval for tool calls?
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