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Harvard ClinicalTrials MCP Server for ClineGive Cline instant access to 16 tools to Get Api Version, Get Study, Get Study Results, and more

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Cline is an autonomous AI coding agent inside VS Code that plans, executes, and iterates on tasks. Wire Harvard ClinicalTrials through Vinkius and Cline gains direct access to every tool. from data retrieval to workflow automation. without leaving the terminal.

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The Harvard ClinicalTrials MCP Server for Cline is a standout in the Data Analytics category — giving your AI agent 16 tools to work with, ready to go from day one.

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Classic Setup·json
{
  "mcpServers": {
    "harvard-clinicaltrials": {
      "url": "https://edge.vinkius.com/[YOUR_TOKEN_HERE]/mcp"
    }
  }
}
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About Harvard ClinicalTrials MCP Server

Connect to the ClinicalTrials.gov API v2 — the largest database of clinical studies worldwide, maintained by the U.S. National Library of Medicine.

Cline operates autonomously inside VS Code. it reads your codebase, plans a strategy, and executes multi-step tasks including Harvard ClinicalTrials tool calls without waiting for prompts between steps. Connect 16 tools through Vinkius and Cline can fetch data, generate code, and commit changes in a single autonomous run.

What you can do

  • Study Search — Search 400K+ clinical trials from 220+ countries
  • Condition Filter — Find trials for specific diseases (cancer, diabetes, Alzheimer's)
  • Intervention Filter — Search by drug, device, or therapy name
  • Sponsor Search — Find trials by organization (Pfizer, NIH, Roche)
  • Phase Filter — Filter by Phase 1-4 to track drug development stages
  • Recruiting — Find trials currently enrolling participants
  • Location — Search by city or country for accessible trials
  • FDA Regulated — Filter for FDA-regulated drug and device trials
  • Pediatric — Find trials including children
  • Rare Diseases — Discover research for orphan conditions
  • Results — Get outcome data from completed studies

The Harvard ClinicalTrials MCP Server exposes 16 tools through the Vinkius. Connect it to Cline in under two minutes — credentials fully managed, no infrastructure to provision, no vendor lock-in. Your configuration, your data, your control.

All 16 Harvard ClinicalTrials tools available for Cline

When Cline connects to Harvard ClinicalTrials through Vinkius, your AI agent gets direct access to every tool listed below — spanning clinical-trials, medical-research, drug-development, and more. Every call runs in a secure, isolated environment with full audit visibility. Beyond a simple connection, you get real-time monitoring of agent activity, enterprise governance, and optimized token usage.

get

Get api version on Harvard ClinicalTrials

gov API version and the timestamp of the most recent data update. Useful for verifying data currency and API availability. Get API version and data timestamp

get

Get study on Harvard ClinicalTrials

g. "NCT04368728"). Returns title, status, phase, enrollment, conditions, interventions, eligibility criteria, sponsor, and study locations. Get clinical trial details by NCT ID

get

Get study results on Harvard ClinicalTrials

Not all trials report results — this is most useful for completed Phase 2-4 studies. Get primary outcome results for a trial

get

Get study timeline on Harvard ClinicalTrials

Essential for understanding the progress and currency of a study. Get the complete timeline of a clinical trial

search

Search by condition on Harvard ClinicalTrials

Examples: "diabetes", "breast cancer", "Alzheimer disease", "COVID-19", "depression", "hypertension". Search trials by medical condition

search

Search by intervention on Harvard ClinicalTrials

Examples: "pembrolizumab", "metformin", "radiation therapy", "cognitive behavioral therapy". Search trials by drug or treatment

search

Search by location on Harvard ClinicalTrials

Essential for finding trials accessible to patients in a particular area. Search trials by geographic location

search

Search by phase on Harvard ClinicalTrials

Phase values: "PHASE1", "PHASE2", "PHASE3", "PHASE4", "EARLY_PHASE1". Phase 3 trials are the largest and most definitive, while Phase 1 trials focus on safety. Search trials by study phase

search

Search by sponsor on Harvard ClinicalTrials

Examples: "Pfizer", "National Cancer Institute", "Roche", "Novartis", "NIH". Search trials by sponsoring organization

search

Search completed on Harvard ClinicalTrials

Completed trials are more likely to have published results and outcomes data. Search completed clinical trials

search

Search device trials on Harvard ClinicalTrials

Covers diagnostic devices, surgical tools, implants, and digital health technologies. Search medical device clinical trials

search

Search fda regulated on Harvard ClinicalTrials

S. Food and Drug Administration. These trials follow the most rigorous regulatory standards. Search FDA-regulated drug trials

search

Search pediatric on Harvard ClinicalTrials

Essential for pediatricians, child health researchers, and parents seeking trials for children. Search pediatric clinical trials

search

Search rare diseases on Harvard ClinicalTrials

Examples: "cystic fibrosis", "sickle cell disease", "Huntington disease", "amyotrophic lateral sclerosis". Search rare disease clinical trials

search

Search recruiting on Harvard ClinicalTrials

Essential for patients seeking to enroll in trials or researchers tracking active studies. Search for currently recruiting studies

search

Search studies on Harvard ClinicalTrials

gov database of over 400,000 clinical studies from 200+ countries. Returns NCT IDs, titles, status, phases, sponsors, conditions, interventions, and locations. Search 400K+ clinical trials worldwide

Connect Harvard ClinicalTrials to Cline via MCP

Follow these steps to wire Harvard ClinicalTrials into Cline. The entire setup takes under two minutes — your credentials stay safe behind Vinkius.

01

Open Cline MCP Settings

Click the MCP Servers icon in the Cline sidebar panel
02

Add remote server

Click "Add MCP Server" and paste the configuration above
03

Enable the server

Toggle the server switch to ON
04

Start using Harvard ClinicalTrials

Ask Cline: "Using Harvard ClinicalTrials, help me...". 16 tools available

Why Use Cline with the Harvard ClinicalTrials MCP Server

Cline provides unique advantages when paired with Harvard ClinicalTrials through the Model Context Protocol.

01

Cline operates autonomously. it reads your codebase, plans a strategy, and executes multi-step tasks including MCP tool calls without step-by-step prompts

02

Runs inside VS Code, so you get MCP tool access alongside your existing extensions, terminal, and version control in a single window

03

Cline can create, edit, and delete files based on MCP tool responses, enabling end-to-end automation from data retrieval to code generation

04

Transparent execution: every tool call and file change is shown in Cline's activity log for full visibility and approval before committing

Harvard ClinicalTrials + Cline Use Cases

Practical scenarios where Cline combined with the Harvard ClinicalTrials MCP Server delivers measurable value.

01

Autonomous feature building: tell Cline to fetch data from Harvard ClinicalTrials and scaffold a complete module with types, handlers, and tests

02

Codebase refactoring: use Harvard ClinicalTrials tools to validate live data while Cline restructures your code to match updated schemas

03

Automated testing: Cline fetches real responses from Harvard ClinicalTrials and generates snapshot tests or mocks based on actual payloads

04

Incident response: query Harvard ClinicalTrials for real-time status and let Cline generate hotfix patches based on the findings

Example Prompts for Harvard ClinicalTrials in Cline

Ready-to-use prompts you can give your Cline agent to start working with Harvard ClinicalTrials immediately.

01

"Find recruiting Phase 3 trials for breast cancer immunotherapy"

02

"Search for Alzheimer's disease trials sponsored by NIH in Boston"

03

"Find pediatric clinical trials for cystic fibrosis"

Troubleshooting Harvard ClinicalTrials MCP Server with Cline

Common issues when connecting Harvard ClinicalTrials to Cline through Vinkius, and how to resolve them.

01

Server shows error in sidebar

Click the server name to see logs. Verify the URL and token are correct.

Harvard ClinicalTrials + Cline FAQ

Common questions about integrating Harvard ClinicalTrials MCP Server with Cline.

01

How does Cline connect to MCP servers?

Cline reads MCP server configurations from its settings panel in VS Code. Add the server URL and Cline discovers all available tools on initialization.
02

Can Cline run MCP tools without approval?

By default, Cline asks for confirmation before executing tool calls. You can configure auto-approval rules for trusted servers in the settings.
03

Does Cline support multiple MCP servers at once?

Yes. Configure as many servers as needed. Cline can use tools from different servers within the same autonomous task execution.

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